hmm.. I'm thinking man. I've diagnosed so many vibrations it's damn ridiculous! It is very difficult to tell without hearing.. feeling it firsthand. It kind of sounds like a U-joint...You would be surprised. Depending on how you drive and where you live (type of roads etc), they can wear out fast at times. As for the trans .... you are 100% sure you DID notice it get better after this flush? if this is true, then it most likely is torque converter shutter. BUT, I've known shutter to be prominent in all gears not just 1 or 2. ... And I also have just learned that torque converter shudder is something to do with torque converter lockup not fully engaging. When you had your trans flushed, do you know if they used Mercon III or Mercon V fluid? If it is an issue with the converter, I have (heard and read) that putting Mercon V in place of the Mercon III can eliminate most shudder issues. A cheaper alternative is to keep the Mercon III you have and put a special additive in. AGain, IDK if this is your problem or not.
.. does your steering wheel shake? Even if it doesn't, it could be a bad tire, or unbalanced tire/rim, warped brake rotor . Can you hear this in the engine at the speeds you mentioned? I mean, does it seem like the engines shudders or the exhaust sounds different?