the yellow wire in the original harness is replaced by the new yellow wire on that plug you bought......it goes to the power lug on the back of the alt.
the black orange wires go into a single wire(dark green) later on in that harness, that wire goes to the starter selenoid and i believe it's a 14 ga green wire. that can be disconnected from the selenoid. that yellow wire ( in the old harness) also joins into that black/orange/wires........you'll have basically by passed all those after installing your new plug.
the only wire in that harness you need to keep is that green one ( it goes to the batt light in your dash and is light green with a red stripe).
so you can either disconnect that green wire at the selenoid ( which again, the black and oragnes tun into that wire ) splice into the green wire you need to keep, and let the wires just hang, or go through the wiring harness and take them all out excpet the one green wire that goes to your new plug. trying not to confuse you....there's 2 green wires......the green wire at the selenoid is again, what those black and oranges turn into, the green wire at the alt plug there is to the batt light, and thats the one you need to keep.......(light green red stripe)so like i said, you can either connect your new plug, and leave the rest to hang, connect the new plug and disconnect the green at the selenoid ( best since those black and orange wires go to nothing now) or you can take that old harness out all together and just leave the green batt light wire on.......hope this makes sense.....