I would take a close look at your outlet manifold when you go to upgrade to the bigger piping. At some point the outlet manifold from the blower case to the piping is going to be a restriction. The stock outlet manifold does not have very much cc of volume. That could potentially be a choke point. Measure the depth from the outlet manifold face to the roof of the manifold and you will see that the air has to take a pretty sharp turn to get out.
That was also a concern of mine. I may raising the roof in that area by extening the welded pipe all the way over to open up that area so the case outlet has more room to flow that air. You can see from my pics posted that I did bite into the that area by 1/2 inch and raised the pipe there to get additional flow. My new design would make it all the way over and raise the entire top by 3/8 inch.