And once you gave it some gas the injectors fire so fast anyway it is not going to make a huge difference.
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I have personally seen major improvements in drivability just by changing the TIMING of when the injector fires.
Having the injector fire on the wrong cylinder will make a drivability difference.
Injector firing order and timing becomes even more important when a large cam is being used.
The problems you describe can be atleast partially fixed with injector order & timing.
The problem with mismatch between the ecu firing order and cam/dist. firing order isn't so much WHEN the injectors fire, but rather how the ecu trims fuel.
There is a left and right O2 sensor. Each sensor measures only one bank. If an injector from the right bank is being measured by the left bank 2 scenarios can play out.
1. If the Adaptive is attempting to apply the same correction to each bank, then things could very well appear to be 'just fine'
2. If the Adaptive is attempting to apply different corrections to each bank, then things will get fubar real quick.
Keep in mind that things could appear to be 'just fine' for several months to several years, then appear to go fubar out of the blue. The Adaptive Strategy is ALWAYS learning and changing the correction factors.
Here is a link that explains it in a little more detail, as I don't do a good job of explaining this...
http://www.fordfuelinjection.com/?p=92
My opinion of getting into the ecu...
It would either work right away, or it wouldn't work right away.
The proposed calibration change is VERY simple to make, and could be done in a matter of minutes...
Just my opinion,
jason