98blackmagic is right about percentages instead of hard numbers. Also know that to get the most out of the S/C you'll need additional mods such as mid pipe, catback, MAF, and preferably an intercooler for safety as well as more power.
For comparison, my 2000 GT Auto dynoe'd ~380 rwhp before the Comp cams were added (same as 400 rwhp on a manual). With equivalent mods on a 98 GT I would expect maybe 325 rwhp (342 on a manual). I only mention this so that you don't expect the same power levels you see on equivalant blown 99-04 GT setups. This is due to (stock) 98 engines having a more restricted airflow.